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777 labs · 31 student voices
Nozomi Ytow, Lecturer
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The Biodiversity Informatics (Nozomi Ytow) Lab studies the logical, theoretical, and information-theoretic foundations of biology. In the faculty list of the College of Biological Sciences at the University of Tsukuba, the lab belongs to the field of Genome Informatics, and its specialty is listed as biodiversity informatics. The faculty list of the College of Biological Sciences includes Nozomi Ytow as a Lecturer.
Daiki Sato, Project Assistant Professor (Early Career Support)
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The lab of Daiki Sato, Project Assistant Professor (Shorei), aims to understand how the psychological makeup and sociality of animals, and their diversity, have evolved. Centered on evolutionary biology, the lab uses a broad range of methods from bioinformatics, molecular biology, and neuroscience, combined with behavioral experiments and field surveys. Its goal is to clarify everything from the molecular mechanisms that give rise to behavior to the course of its evolution, and further the effects that behavioral diversity has on societies and ecosystems. Going forward, the lab hopes to develop its research with an eye toward medical applications such as mental health, and ecological applications such as marine environment conservation.
Ryuhei Harada, Associate Professor
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The Harada Lab studies how biomolecules such as proteins function, using computational science including molecular dynamics. While many labs in the College of Biological Sciences deal with subjects ranging from cells to ecosystems, this lab targets smaller molecules such as proteins, nucleic acids, and lipids. Unusually for the college, the lab does not conduct experiments and carries out its research using supercomputers. Students with no prior knowledge of computers or molecular simulation are supported so that they can learn from the basics.
Yoshihide Tokuno, Assistant Professor
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The Energy Microbiology Lab studies how microorganisms generate energy when they form multicellular assemblies. With "organisms" and "energy" as keywords, the lab extends its research into a wide range of fields, such as life sciences and biotechnology. Using confocal fluorescence microscopy, the lab observes biofilms, which are aggregates of microorganisms, in 3D and investigates how energy is produced inside them. The lab also works on increasing the output of microbial fuel cells and on developing wearable sensors that use membrane vesicles to measure sweat.
Hidekazu Kuwayama, Professor
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The lab studies how cells perceive space and move, mainly using cellular slime molds (Dictyostelium). Using molecular biology and genetic engineering, the lab creates and examines strains with disrupted genes and strains expressing genes fused to fluorescent proteins. It also conducts research related to pharmacology and medicine, such as cellular tolerance to caffeine and the function of genes involved in human Huntington's disease. As the core institution of the National BioResource Project for cellular slime molds, the lab also collects, preserves, and distributes cellular slime mold resources.
Kyoichi Sawamura, Associate Professor
0 student voices
The Evolutionary Genetics Lab uses Drosophila (fruit flies) to study the genetic mechanisms of speciation, the process by which new species arise. Hybrids between different species are rarely seen in nature, and most of them are sterile and cannot leave offspring. The lab believes that species persist because reproductive isolation keeps them from mixing, and that new species arise when such isolation is acquired. On the lab's website, it is introduced under the name "Evolutionary Genetics Laboratory (Kyoichi Sawamura Lab)."
Yuji Inagaki, Professor
0 student voices
The Microbial Molecular Evolution Lab tackles a range of unsolved questions about the evolution of microbes, especially eukaryotic microbes. Its main method is molecular phylogenetic analysis, which analyzes nucleic acid and amino acid sequences. The lab investigates the phylogenetic relationships among the major groups of eukaryotes and the evolution of translation elongation factors. The lab's website is published as the personal homepage of Professor Yuji Inagaki.
Masanori Toyofuku, Associate Professor
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The Toyofuku Lab studies interactions between bacteria and membrane vesicles (MVs). Bacteria were long thought to simply divide independently of one another, but they are now known to interact in a surprising variety of ways. Using model bacteria ranging from pathogens to bacteria used in environmental remediation, the lab investigates bacterial communication and MVs. By exploring how the abilities of individual bacteria are coordinated across the whole population, the lab aims to understand bacterial societies.
Shunta Yorimoto, Assistant Professor
0 student voices
The evolutionary biology lab studies the molecular mechanisms and evolution of interactions between organisms, such as symbiosis, parasitism, and sociality. Assistant Professor Shunta Yorimoto specializes in evolutionary biology, and is introduced as a faculty member in genome informatics in the College of Biological Sciences' faculty list.
Shuji Shigenobu, Professor
0 student voices
The Shigenobu Lab (Genome Informatics) uses genome science to understand symbiosis between living organisms. The lab aims to clarify the molecular mechanisms that support symbiosis and the evolutionary paths behind it, and to understand both its diversity and its shared principles. Combining experiments and bioinformatics without separating the two, the lab mainly studies aphids, a group of insects, as a model for symbiosis research. The lab works at the National Institute for Basic Biology (Okazaki, Aichi) and the TARA Center at the University of Tsukuba, where it was launched in April 2024.
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