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Chromatin Metabolism Regulation Lab (Ura-Sassa Lab)
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Starting from the histones that DNA wraps around, the lab uncovers how the genome is protected and put to use.

AboutAbout the lab
Unraveling how the genome works, starting from histones.
The Chromatin Metabolism Regulation Lab studies the function of histones, the proteins that genomic DNA wraps around.
Inside the cell nucleus, DNA wraps around histones to form a structure called chromatin.
DNA reactions such as replication, transcription, repair, and recombination all take place on this chromatin.
The lab focuses on chemical modifications of histones and investigates how they work from two sides: gene expression and DNA repair.
The lab is jointly run by Professor Kiyoe Ura and Associate Professor Akira Sassa, and the two share common research rules and the same broad research direction.
Key terms
- Chromatin
- A structure inside the cell nucleus in which DNA is wrapped around proteins called histones and folded
- Histone modification
- A chemical change in which groups such as methyl or acetyl groups are attached to histones. It serves as a marker for whether a gene is expressed
- Epigenome
- The full set of marks that determine which genes are used and when, without changing the DNA base sequence
NewsLab news
Evaluation method for visualizing epigenetic changes published in Bio-protocol
Student wins Best Presentation Award at the 54th Annual Meeting of the Japanese Environmental Mutagen and Genome Society
Study reveals that RNA rewriting protects DNA, published in Frontiers in Genetics
Associate Professor Sassa receives the Chiba University Advanced Academic Award
Study reveals the effect of RNA damage on SARS-CoV-2 genome synthesis, published in Journal of Biological Chemistry
ResearchResearch themes
Genomic DNA forms chromatin together with histones, and replication, transcription, repair, and recombination all proceed on it. Using histone modifications as a clue, the lab investigates how gene expression and the response to DNA damage are linked.
*Illustrative imageHistones that control the genome
More than 100 types of chemical histone modifications, such as acetylation and methylation, have been found so far, and they act as genetic information beyond the base sequence. Focusing on NSD2, the histone H3K36 methyltransferase, the lab is exploring the mechanisms that link transcription and the DNA damage response.
*Illustrative imageGenome instability and repair
DNA is constantly damaged by chemicals in the environment and by reactive oxygen species produced inside the body. The lab investigates which repair and tolerance mechanisms act on which types of damage, using both protein biochemistry and cultured human cells.
*Illustrative imageChemicals and the epigenome
Epigenomic information can also change in response to environmental factors such as chemicals and oxidative stress. By adapting chemical safety testing with mammalian cells (genotoxicity testing), the lab is developing an experimental system that can detect these changes easily.
*Illustrative imageGenome abnormalities and innate immunity
The lab has found that when damage accumulates in a cell's own genome, immune pathways become abnormally activated. By investigating across gene mutations, epigenetic modifications, and the three-dimensional structure of chromosomes, the lab aims to understand the full picture.
MembersFaculty
The members of the Chromatin Metabolism Regulation Lab consist of faculty, postdoctoral researchers, visiting researchers, technical staff, and doctoral, master's, and undergraduate students.As of 2026
- ProfessorKiyoe Ura
- Associate ProfessorAkira Sassa
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Report an errorAbout the images
The top and research theme images are illustrative and were not taken at the lab. They are cropped from Wikimedia Commons images. Cropped CC BY-SA images are provided under the same CC BY-SA license as the original (version shown on each line).
- Top image: “Nucleosome 1KX5 2” By Richard Wheeler (Zephyris) 2005. / CC BY-SA 3.0 (cropped)
- Histones that control the genome: “Chromatin and histones” Darryl Leja, NHGRI / Public domain (cropped)
- Genome instability and repair: “DNA Repair” Tom Ellenberger, Washington University School of Medicine in St. Louis. / Public domain (cropped)
- Chemicals and the epigenome: “Scientist checks cell culture flask on microscope” Peter Saxon / CC BY-SA 4.0 (cropped)
- Genome abnormalities and innate immunity: “Confocal micrograph of stained HeLa” Dedyseptiadi7 / CC BY-SA 4.0 (cropped)
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